- sushie.io.read_data(n_pop: int, ancestry_index: DataFrame, pheno_paths: List[str], covar_paths: List[str] | None, geno_paths: List[str], geno_func: Callable) List[RawData][source]
 Read in pheno, covar, and genotype data and convert it to raw data object.
- Parameters:
 - n_pop: int¶
 The int to indicate the number of ancestries.
- ancestry_index: DataFrame¶
 The DataFrame that contains ancestry index.
- pheno_paths: List[str]¶
 The path for phenotype data across ancestries.
- covar_paths: List[str] | None¶
 The path for covariates data across ancestries.
- geno_paths: List[str]¶
 The path for genotype data across ancestries.
- geno_func: Callable¶
 The function to read in genotypes depending on the format.
- Returns:
 A list of Raw data object (
RawData).- Return type:
 List[RawData]
  
    
      Last update:
      Oct 27, 2024