-
sushie.cli.sushie_wrapper(data: CleanData, cv_data: List[CVData] | None, args: Namespace, snps: DataFrame, meta: bool =
False, mega: bool =False) None[source] The wrapper function to run SuShiE in regular, meta, or mega.
- Parameters:
- data: CleanData¶
The clean data for SuShiE inference.
- cv_data: List[CVData] | None¶
The cross-validation dataset.
- args: Namespace¶
The command line parameter input.
- snps: DataFrame¶
The SNP information.
- meta: bool =
False¶ The indicator whether to prepare datasets for meta SuShiE.
- mega: bool =
False¶ The indicator whether to prepare datasets for mega SuShiE.
Last update:
Oct 27, 2024